3D structure

PDB id
4V5B (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of PDF binding helix in complex with the ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
3.74 Å

Loop

Sequence
UAUGAAGAAG*UGUAAAGUA
Length
19 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4V5B|1|BA|U|407
4V5B|1|BA|A|408
4V5B|1|BA|U|409
4V5B|1|BA|G|410
4V5B|1|BA|A|411
4V5B|1|BA|A|412
4V5B|1|BA|G|413
4V5B|1|BA|A|414
4V5B|1|BA|A|415
4V5B|1|BA|G|416
*
4V5B|1|BA|U|427
4V5B|1|BA|G|428
4V5B|1|BA|U|429
4V5B|1|BA|A|430
4V5B|1|BA|A|431
4V5B|1|BA|A|432
4V5B|1|BA|G|433
4V5B|1|BA|U|434
4V5B|1|BA|A|435

Current chains

Chain BA
16S RIBOSOMAL RNA

Nearby chains

Chain BD
30S RIBOSOMAL PROTEIN S4

Coloring options:

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