IL_4V5B_166

3D structure

PDB id

4V5B (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of PDF binding helix in complex with the ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.74 Å

Loop

Sequence

GCCUGAAUC*GUGAGC

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V5B|1|CB|G|273
4V5B|1|CB|C|274
4V5B|1|CB|C|275
4V5B|1|CB|U|276
4V5B|1|CB|G|277
4V5B|1|CB|A|278
4V5B|1|CB|A|279
4V5B|1|CB|U|280
4V5B|1|CB|C|281
*
4V5B|1|CB|G|359
4V5B|1|CB|U|360
4V5B|1|CB|G|361
4V5B|1|CB|A|362
4V5B|1|CB|G|363
4V5B|1|CB|C|364

Current chains

Chain CB

23S RIBOSOMAL RNA

Nearby chains