IL_4V5B_201

3D structure

PDB id

4V5B (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of PDF binding helix in complex with the ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.74 Å

Loop

Sequence

AGAAG*CCUGCU

Length

11 nucleotides

Bulged bases

4V5B|1|CB|U|1559

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V5B|1|CB|A|1431
4V5B|1|CB|G|1432
4V5B|1|CB|A|1433
4V5B|1|CB|A|1434
4V5B|1|CB|G|1435
*
4V5B|1|CB|C|1557
4V5B|1|CB|C|1558
4V5B|1|CB|U|1559
4V5B|1|CB|G|1560
4V5B|1|CB|C|1561
4V5B|1|CB|U|1562

Current chains

Chain CB

23S RIBOSOMAL RNA

Nearby chains