IL_4V5B_216
3D structure
- PDB id
- 4V5B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of PDF binding helix in complex with the ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.74 Å
Loop
- Sequence
- GCA*UGAU
- Length
- 7 nucleotides
- Bulged bases
- 4V5B|1|CB|A|1981
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V5B_216 not in the Motif Atlas
- Geometric match to IL_3MEI_002
- Geometric discrepancy: 0.2824
- The information below is about IL_3MEI_002
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_87907.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 179
Unit IDs
4V5B|1|CB|G|1770
4V5B|1|CB|C|1771
4V5B|1|CB|A|1772
*
4V5B|1|CB|U|1979
4V5B|1|CB|G|1980
4V5B|1|CB|A|1981
4V5B|1|CB|U|1982
Current chains
- Chain CB
- 23S RIBOSOMAL RNA
Nearby chains
- Chain CC
- 50S RIBOSOMAL PROTEIN L2
Coloring options: