IL_4V5B_275

3D structure

PDB id

4V5B (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of PDF binding helix in complex with the ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.74 Å

Loop

Sequence

CGGCUAAC*GG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V5B|1|DA|C|504
4V5B|1|DA|G|505
4V5B|1|DA|G|506
4V5B|1|DA|C|507
4V5B|1|DA|U|508
4V5B|1|DA|A|509
4V5B|1|DA|A|510
4V5B|1|DA|C|511
*
4V5B|1|DA|G|540
4V5B|1|DA|G|541

Current chains

Chain DA

16S RIBOSOMAL RNA

Nearby chains

Chain DD

30S RIBOSOMAL PROTEIN S4

Chain DL

30S RIBOSOMAL PROTEIN S12