3D structure

PDB id
4V5B (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of PDF binding helix in complex with the ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
3.74 Å

Loop

Sequence
UAUGUAGGU*GCUGAAA
Length
16 nucleotides
Bulged bases
4V5B|1|AB|U|1714
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4V5B|1|AB|U|1712
4V5B|1|AB|A|1713
4V5B|1|AB|U|1714
4V5B|1|AB|G|1715
4V5B|1|AB|U|1716
4V5B|1|AB|A|1717
4V5B|1|AB|G|1718
4V5B|1|AB|G|1719
4V5B|1|AB|U|1720
*
4V5B|1|AB|G|1740
4V5B|1|AB|C|1741
4V5B|1|AB|U|1742
4V5B|1|AB|G|1743
4V5B|1|AB|A|1744
4V5B|1|AB|A|1745
4V5B|1|AB|A|1746

Current chains

Chain AB
23S RIBOSOMAL RNA

Nearby chains

No other chains within 10Å

Coloring options:

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