IL_4V5B_343
3D structure
- PDB id
- 4V5B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of PDF binding helix in complex with the ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.74 Å
Loop
- Sequence
- UGG*CACA
- Length
- 7 nucleotides
- Bulged bases
- 4V5B|1|BA|A|1227
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V5B_343 not in the Motif Atlas
- Geometric match to IL_2O3X_003
- Geometric discrepancy: 0.3321
- The information below is about IL_2O3X_003
- Detailed Annotation
- Decoding loop related
- Broad Annotation
- Decoding loop related
- Motif group
- IL_31737.3
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 12
Unit IDs
4V5B|1|BA|U|952
4V5B|1|BA|G|953
4V5B|1|BA|G|954
*
4V5B|1|BA|C|1226
4V5B|1|BA|A|1227
4V5B|1|BA|C|1228
4V5B|1|BA|A|1229
Current chains
- Chain BA
- 16S RIBOSOMAL RNA
Nearby chains
- Chain BM
- 30S RIBOSOMAL PROTEIN S13
- Chain BS
- 30S RIBOSOMAL PROTEIN S19
Coloring options: