IL_4V5B_359
3D structure
- PDB id
- 4V5B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of PDF binding helix in complex with the ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.74 Å
Loop
- Sequence
- CCCAGACAGCCAGGAUGUUGGCUUAGAAGCAGCCAUCAUUUAAAGAAA*UCACUGGUCGAG
- Length
- 60 nucleotides
- Bulged bases
- 4V5B|1|CB|C|1045, 4V5B|1|CB|A|1046
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4V5B|1|CB|C|1043
4V5B|1|CB|C|1044
4V5B|1|CB|C|1045
4V5B|1|CB|A|1046
4V5B|1|CB|G|1047
4V5B|1|CB|A|1048
4V5B|1|CB|C|1049
4V5B|1|CB|A|1050
4V5B|1|CB|G|1051
4V5B|1|CB|C|1052
4V5B|1|CB|C|1053
4V5B|1|CB|A|1054
4V5B|1|CB|G|1055
4V5B|1|CB|G|1056
4V5B|1|CB|A|1057
4V5B|1|CB|U|1058
4V5B|1|CB|G|1059
4V5B|1|CB|U|1060
4V5B|1|CB|U|1061
4V5B|1|CB|G|1062
4V5B|1|CB|G|1063
4V5B|1|CB|C|1064
4V5B|1|CB|U|1065
4V5B|1|CB|U|1066
4V5B|1|CB|A|1067
4V5B|1|CB|G|1068
4V5B|1|CB|A|1069
4V5B|1|CB|A|1070
4V5B|1|CB|G|1071
4V5B|1|CB|C|1072
4V5B|1|CB|A|1073
4V5B|1|CB|G|1074
4V5B|1|CB|C|1075
4V5B|1|CB|C|1076
4V5B|1|CB|A|1077
4V5B|1|CB|U|1078
4V5B|1|CB|C|1079
4V5B|1|CB|A|1080
4V5B|1|CB|U|1081
4V5B|1|CB|U|1082
4V5B|1|CB|U|1083
4V5B|1|CB|A|1084
4V5B|1|CB|A|1085
4V5B|1|CB|A|1086
4V5B|1|CB|G|1087
4V5B|1|CB|A|1088
4V5B|1|CB|A|1089
4V5B|1|CB|A|1090
*
4V5B|1|CB|U|1101
4V5B|1|CB|C|1102
4V5B|1|CB|A|1103
4V5B|1|CB|C|1104
4V5B|1|CB|U|1105
4V5B|1|CB|G|1106
4V5B|1|CB|G|1107
4V5B|1|CB|U|1108
4V5B|1|CB|C|1109
4V5B|1|CB|G|1110
4V5B|1|CB|A|1111
4V5B|1|CB|G|1112
Current chains
- Chain CB
- 23S RIBOSOMAL RNA
Nearby chains
- Chain C4
- 50S RIBOSOMAL PROTEIN L36
- Chain CG
- 50S RIBOSOMAL PROTEIN L6
- Chain CI
- 50S RIBOSOMAL PROTEIN L11
Coloring options: