IL_4V5D_337
3D structure
- PDB id
- 4V5D (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A- and P-site tRNAs, and E-site tRNA.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.5 Å
Loop
- Sequence
- CAG*UGGG
- Length
- 7 nucleotides
- Bulged bases
- 4V5D|1|BA|G|352
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V5D_337 not in the Motif Atlas
- Homologous match to IL_9DFE_010
- Geometric discrepancy: 0.1849
- The information below is about IL_9DFE_010
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_85599.2
- Basepair signature
- cWW-tHS-cWW
- Number of instances in this motif group
- 9
Unit IDs
4V5D|1|BA|C|288
4V5D|1|BA|A|289
4V5D|1|BA|G|290
*
4V5D|1|BA|U|350
4V5D|1|BA|G|351
4V5D|1|BA|G|352
4V5D|1|BA|G|353
Current chains
- Chain BA
- 23S RIBOSOMAL RNA
Nearby chains
No other chains within 10ÅColoring options: