IL_4V5G_221
3D structure
- PDB id
- 4V5G (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The crystal structure of the 70S ribosome bound to EF-Tu and tRNA
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.6 Å
Loop
- Sequence
- GGGAG*CGUGGAUC
- Length
- 13 nucleotides
- Bulged bases
- 4V5G|1|DA|G|100
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V5G_221 not in the Motif Atlas
- Homologous match to IL_4WF9_004
- Geometric discrepancy: 0.2099
- The information below is about IL_4WF9_004
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_01488.3
- Basepair signature
- cWW-tSS-tSH-L-R-tHS-L-cWW
- Number of instances in this motif group
- 10
Unit IDs
4V5G|1|DA|G|81
4V5G|1|DA|G|82
4V5G|1|DA|G|83
4V5G|1|DA|A|84
4V5G|1|DA|G|85
*
4V5G|1|DA|C|97
4V5G|1|DA|G|98
4V5G|1|DA|U|99
4V5G|1|DA|G|100
4V5G|1|DA|G|102
4V5G|1|DA|A|103
4V5G|1|DA|U|104
4V5G|1|DA|C|105
Current chains
- Chain DA
- 23S RIBOSOMAL RNA
Nearby chains
- Chain D2
- 50S RIBOSOMAL PROTEIN L29
- Chain DY
- 50S RIBOSOMAL PROTEIN L24
Coloring options: