IL_4V5G_255

3D structure

PDB id

4V5G (explore in PDB, NAKB, or RNA 3D Hub)

Description

The crystal structure of the 70S ribosome bound to EF-Tu and tRNA

Experimental method

X-RAY DIFFRACTION

Resolution

3.6 Å

Loop

Sequence

UG*CAG

Length

5 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V5G_255 not in the Motif Atlas

Geometric match to IL_7Q80_001

Geometric discrepancy: 0.2867

The information below is about IL_7Q80_001

Detailed Annotation

Multiple bulged bases

Broad Annotation

No text annotation

Motif group

IL_84476.1

Basepair signature

cWW-cWW

Number of instances in this motif group

13

Unit IDs

4V5G|1|DA|U|1167
4V5G|1|DA|G|1168
*
4V5G|1|DA|C|1181
4V5G|1|DA|A|1182
4V5G|1|DA|G|1183

Current chains

Chain DA

23S RIBOSOMAL RNA

Nearby chains

Chain D3

50S RIBOSOMAL PROTEIN L30