IL_4V5G_392
3D structure
- PDB id
- 4V5G (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The crystal structure of the 70S ribosome bound to EF-Tu and tRNA
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.6 Å
Loop
- Sequence
- CCGAUGAAG*UGGAGG
- Length
- 15 nucleotides
- Bulged bases
- 4V5G|1|DA|U|1211
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V5G_392 not in the Motif Atlas
- Geometric match to IL_6HCT_001
- Geometric discrepancy: 0.3361
- The information below is about IL_6HCT_001
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_64900.1
- Basepair signature
- cWW-cWW-tSS-tSH-L-tHS-R-cWW-L
- Number of instances in this motif group
- 3
Unit IDs
4V5G|1|DA|C|1207
4V5G|1|DA|C|1208
4V5G|1|DA|G|1209
4V5G|1|DA|A|1210
4V5G|1|DA|U|1211
4V5G|1|DA|G|1212
4V5G|1|DA|A|1213
4V5G|1|DA|A|1214
4V5G|1|DA|G|1215
*
4V5G|1|DA|U|1234
4V5G|1|DA|G|1235
4V5G|1|DA|G|1236
4V5G|1|DA|A|1237
4V5G|1|DA|G|1238
4V5G|1|DA|G|1239
Current chains
- Chain DA
- 23S RIBOSOMAL RNA
Nearby chains
- Chain DU
- 50S RIBOSOMAL PROTEIN L20
Coloring options: