IL_4V5H_008

3D structure

PDB id

4V5H (explore in PDB, NAKB, or RNA 3D Hub)

Description

E.Coli 70s Ribosome Stalled During Translation Of Tnac Leader Peptide.

Experimental method

ELECTRON MICROSCOPY

Resolution

5.8 Å

Loop

Sequence

GG*UGC

Length

5 nucleotides

Bulged bases

4V5H|1|AA|G|94

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V5H_008 not in the Motif Atlas

Geometric match to IL_6JQ5_001

Geometric discrepancy: 0.3267

The information below is about IL_6JQ5_001

Detailed Annotation

Stack outside cWW

Broad Annotation

Stack outside cWW

Motif group

IL_00225.14

Basepair signature

cWW-L-cWW

Number of instances in this motif group

50

Unit IDs

4V5H|1|AA|G|75
4V5H|1|AA|G|76
*
4V5H|1|AA|U|93
4V5H|1|AA|G|94
4V5H|1|AA|C|95

Current chains

Chain AA

16S RIBOSOMAL RNA

Nearby chains