IL_4V5H_017

3D structure

PDB id

4V5H (explore in PDB, NAKB, or RNA 3D Hub)

Description

E.Coli 70s Ribosome Stalled During Translation Of Tnac Leader Peptide.

Experimental method

ELECTRON MICROSCOPY

Resolution

5.8 Å

Loop

Sequence

UUG*CA

Length

5 nucleotides

Bulged bases

4V5H|1|AA|U|368

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V5H_017 not in the Motif Atlas

Homologous match to IL_4LFB_014

Geometric discrepancy: 0.1457

The information below is about IL_4LFB_014

Detailed Annotation

Single bulged U

Broad Annotation

No text annotation

Motif group

IL_97561.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

129

Unit IDs

4V5H|1|AA|U|367
4V5H|1|AA|U|368
4V5H|1|AA|G|369
*
4V5H|1|AA|C|392
4V5H|1|AA|A|393

Current chains

Chain AA

16S RIBOSOMAL RNA

Nearby chains

Chain AP

30S RIBOSOMAL PROTEIN S16