IL_4V5H_033
3D structure
- PDB id
- 4V5H (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E.Coli 70s Ribosome Stalled During Translation Of Tnac Leader Peptide.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5.8 Å
Loop
- Sequence
- GA*UGAC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V5H_033 not in the Motif Atlas
- Geometric match to IL_1KUQ_001
- Geometric discrepancy: 0.1198
- The information below is about IL_1KUQ_001
- Detailed Annotation
- Major groove platform; stack outside cWW
- Broad Annotation
- Major groove platform
- Motif group
- IL_74641.1
- Basepair signature
- cWW-tSH-cWW-L
- Number of instances in this motif group
- 32
Unit IDs
4V5H|1|AA|G|654
4V5H|1|AA|A|655
*
4V5H|1|AA|U|751
4V5H|1|AA|G|752
4V5H|1|AA|A|753
4V5H|1|AA|C|754
Current chains
- Chain AA
- 16S RIBOSOMAL RNA
Nearby chains
- Chain AH
- 30S RIBOSOMAL PROTEIN S8
- Chain AO
- 30S RIBOSOMAL PROTEIN S15
Coloring options: