IL_4V5H_084

3D structure

PDB id

4V5H (explore in PDB, NAKB, or RNA 3D Hub)

Description

E.Coli 70s Ribosome Stalled During Translation Of Tnac Leader Peptide.

Experimental method

ELECTRON MICROSCOPY

Resolution

5.8 Å

Loop

Sequence

CCUGAAUC*GUGAG

Length

13 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V5H_084 not in the Motif Atlas

Homologous match to IL_5J7L_253

Geometric discrepancy: 0.5212

The information below is about IL_5J7L_253

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_77870.1

Basepair signature

cWW-L-R-L-tHS-L-cWW-L-cWW

Number of instances in this motif group

2

Unit IDs

4V5H|1|BB|C|274
4V5H|1|BB|C|275
4V5H|1|BB|U|276
4V5H|1|BB|G|277
4V5H|1|BB|A|278
4V5H|1|BB|A|279
4V5H|1|BB|U|280
4V5H|1|BB|C|281
*
4V5H|1|BB|G|359
4V5H|1|BB|U|360
4V5H|1|BB|G|361
4V5H|1|BB|A|362
4V5H|1|BB|G|363

Current chains

Chain BB

23S RIBOSOMAL RNA

Nearby chains