IL_4V5H_105

3D structure

PDB id

4V5H (explore in PDB, NAKB, or RNA 3D Hub)

Description

E.Coli 70s Ribosome Stalled During Translation Of Tnac Leader Peptide.

Experimental method

ELECTRON MICROSCOPY

Resolution

5.8 Å

Loop

Sequence

GGG*UUAC

Length

7 nucleotides

Bulged bases

4V5H|1|BB|A|896

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V5H_105 not in the Motif Atlas

Geometric match to IL_6CZR_171

Geometric discrepancy: 0.3184

The information below is about IL_6CZR_171

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_87907.1

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

183

Unit IDs

4V5H|1|BB|G|880
4V5H|1|BB|G|881
4V5H|1|BB|G|882
*
4V5H|1|BB|U|894
4V5H|1|BB|U|895
4V5H|1|BB|A|896
4V5H|1|BB|C|897

Current chains

Chain BB

23S RIBOSOMAL RNA

Nearby chains