IL_4V5H_125

3D structure

PDB id

4V5H (explore in PDB, NAKB, or RNA 3D Hub)

Description

E.Coli 70s Ribosome Stalled During Translation Of Tnac Leader Peptide.

Experimental method

ELECTRON MICROSCOPY

Resolution

5.8 Å

Loop

Sequence

UG*CAUCAG

Length

8 nucleotides

Bulged bases

4V5H|1|BB|U|1584

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V5H_125 not in the Motif Atlas

Homologous match to IL_5J7L_294

Geometric discrepancy: 0.3305

The information below is about IL_5J7L_294

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_87211.1

Basepair signature

cWW-cSW-L-cWW-L

Number of instances in this motif group

1

Unit IDs

4V5H|1|BB|U|1415
4V5H|1|BB|G|1416
*
4V5H|1|BB|C|1582
4V5H|1|BB|A|1583
4V5H|1|BB|U|1584
4V5H|1|BB|C|1585
4V5H|1|BB|A|1586
4V5H|1|BB|G|1587

Current chains

Chain BB

23S RIBOSOMAL RNA

Nearby chains