IL_4V5H_148

3D structure

PDB id

4V5H (explore in PDB, NAKB, or RNA 3D Hub)

Description

E.Coli 70s Ribosome Stalled During Translation Of Tnac Leader Peptide.

Experimental method

ELECTRON MICROSCOPY

Resolution

5.8 Å

Loop

Sequence

UUAG*CGAAG

Length

9 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V5H_148 not in the Motif Atlas

Homologous match to IL_5J7L_317

Geometric discrepancy: 0.1637

The information below is about IL_5J7L_317

Detailed Annotation

UAA/GAN related

Broad Annotation

No text annotation

Motif group

IL_77691.5

Basepair signature

cWW-tSH-L-R-L-cWW

Number of instances in this motif group

7

Unit IDs

4V5H|1|BB|U|1864
4V5H|1|BB|U|1865
4V5H|1|BB|A|1866
4V5H|1|BB|G|1867
*
4V5H|1|BB|C|1874
4V5H|1|BB|G|1875
4V5H|1|BB|A|1876
4V5H|1|BB|A|1877
4V5H|1|BB|G|1878

Current chains

Chain BB

23S RIBOSOMAL RNA

Nearby chains