IL_4V5H_167
3D structure
- PDB id
- 4V5H (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E.Coli 70s Ribosome Stalled During Translation Of Tnac Leader Peptide.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5.8 Å
Loop
- Sequence
- AUA*UGUUU
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V5H_167 not in the Motif Atlas
- Homologous match to IL_5J7L_337
- Geometric discrepancy: 0.0971
- The information below is about IL_5J7L_337
- Detailed Annotation
- Major groove minor groove platform with extra cWW
- Broad Annotation
- Major groove minor groove platform with extra cWW
- Motif group
- IL_51387.3
- Basepair signature
- cWW-cSH-cWW-cWW
- Number of instances in this motif group
- 21
Unit IDs
4V5H|1|BB|A|2459
4V5H|1|BB|U|2460
4V5H|1|BB|A|2461
*
4V5H|1|BB|U|2489
4V5H|1|BB|G|2490
4V5H|1|BB|U|2491
4V5H|1|BB|U|2492
4V5H|1|BB|U|2493
Current chains
- Chain BB
- 23S RIBOSOMAL RNA
Nearby chains
- Chain BD
- 50S RIBOSOMAL PROTEIN L3
- Chain BM
- 50S RIBOSOMAL PROTEIN L16
Coloring options: