IL_4V5H_183

3D structure

PDB id

4V5H (explore in PDB, NAKB, or RNA 3D Hub)

Description

E.Coli 70s Ribosome Stalled During Translation Of Tnac Leader Peptide.

Experimental method

ELECTRON MICROSCOPY

Resolution

5.8 Å

Loop

Sequence

UGUAAG*UUGAG

Length

11 nucleotides

Bulged bases

4V5H|1|BB|U|2849

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V5H_183 not in the Motif Atlas

Homologous match to IL_4WF9_108

Geometric discrepancy: 0.2162

The information below is about IL_4WF9_108

Detailed Annotation

tHS double platform

Broad Annotation

No text annotation

Motif group

IL_48489.1

Basepair signature

cWW-tSH-L-tHH-L-cWW

Number of instances in this motif group

8

Unit IDs

4V5H|1|BB|U|2847
4V5H|1|BB|G|2848
4V5H|1|BB|U|2849
4V5H|1|BB|A|2850
4V5H|1|BB|A|2851
4V5H|1|BB|G|2852
*
4V5H|1|BB|U|2865
4V5H|1|BB|U|2866
4V5H|1|BB|G|2867
4V5H|1|BB|A|2868
4V5H|1|BB|G|2869

Current chains

Chain BB

23S RIBOSOMAL RNA

Nearby chains

Chain BN

50S RIBOSOMAL PROTEIN L17

Chain BP

50S RIBOSOMAL PROTEIN L19