IL_4V5H_190

3D structure

PDB id

4V5H (explore in PDB, NAKB, or RNA 3D Hub)

Description

E.Coli 70s Ribosome Stalled During Translation Of Tnac Leader Peptide.

Experimental method

ELECTRON MICROSCOPY

Resolution

5.8 Å

Loop

Sequence

GGAGGCUUUGAAG*UGGAGCCGACCUUGAAAUAC

Length

33 nucleotides

Bulged bases

4V5H|1|BB|C|2129, 4V5H|1|BB|U|2130, 4V5H|1|BB|U|2131, 4V5H|1|BB|A|2158, 4V5H|1|BB|G|2159

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V5H|1|BB|G|2124
4V5H|1|BB|G|2125
4V5H|1|BB|A|2126
4V5H|1|BB|G|2127
4V5H|1|BB|G|2128
4V5H|1|BB|C|2129
4V5H|1|BB|U|2130
4V5H|1|BB|U|2131
4V5H|1|BB|U|2132
4V5H|1|BB|G|2133
4V5H|1|BB|A|2134
4V5H|1|BB|A|2135
4V5H|1|BB|G|2136
*
4V5H|1|BB|U|2155
4V5H|1|BB|G|2156
4V5H|1|BB|G|2157
4V5H|1|BB|A|2158
4V5H|1|BB|G|2159
4V5H|1|BB|C|2160
4V5H|1|BB|C|2161
4V5H|1|BB|G|2162
4V5H|1|BB|A|2163
4V5H|1|BB|C|2164
4V5H|1|BB|C|2165
4V5H|1|BB|U|2166
4V5H|1|BB|U|2167
4V5H|1|BB|G|2168
4V5H|1|BB|A|2169
4V5H|1|BB|A|2170
4V5H|1|BB|A|2171
4V5H|1|BB|U|2172
4V5H|1|BB|A|2173
4V5H|1|BB|C|2174

Current chains

Chain BB

23S RIBOSOMAL RNA

Nearby chains

Chain B5

50S RIBOSOMAL PROTEIN L1