IL_4V5J_203
3D structure
- PDB id
- 4V5J (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 70S ribosome bound to Release factor 2 and a substrate analog provides insights into catalysis of peptide release
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- GGGAG*UC
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V5J_203 not in the Motif Atlas
- Homologous match to IL_5J7L_036
- Geometric discrepancy: 0.099
- The information below is about IL_5J7L_036
- Detailed Annotation
- Left turn
- Broad Annotation
- Left turn
- Motif group
- IL_29346.2
- Basepair signature
- cWW-L-cWW-L-L
- Number of instances in this motif group
- 3
Unit IDs
4V5J|1|CA|G|774
4V5J|1|CA|G|775
4V5J|1|CA|G|776
4V5J|1|CA|A|777
4V5J|1|CA|G|778
*
4V5J|1|CA|U|804
4V5J|1|CA|C|805
Current chains
- Chain CA
- 16S Ribosomal RNA
Nearby chains
- Chain CK
- 30S RIBOSOMAL PROTEIN S11
- Chain DA
- Large subunit ribosomal RNA; LSU rRNA
- Chain DD
- 50S RIBOSOMAL PROTEIN L2
Coloring options: