IL_4V5L_176

3D structure

PDB id

4V5L (explore in PDB, NAKB, or RNA 3D Hub)

Description

The structure of EF-Tu and aminoacyl-tRNA bound to the 70S ribosome with a GTP analog

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

UAG*CGAAA

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V5L_176 not in the Motif Atlas

Homologous match to IL_9DFE_011

Geometric discrepancy: 0.2295

The information below is about IL_9DFE_011

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_76658.1

Basepair signature

cWW-L-R-cSH-cWW

Number of instances in this motif group

4

Unit IDs

4V5L|1|BA|U|293
4V5L|1|BA|A|294
4V5L|1|BA|G|295
*
4V5L|1|BA|C|343
4V5L|1|BA|G|344
4V5L|1|BA|A|345
4V5L|1|BA|A|346
4V5L|1|BA|A|347

Current chains

Chain BA

23S RIBOSOMAL RNA

Nearby chains

Chain BY

50S RIBOSOMAL PROTEIN L24