Motif IL_76658.1 Version IL_76658.1 of this group appears in releases 4.0 to 4.0
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | break | 6 | 7 | 8 | 1-8 | 3-4 | 5-6 | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_4WF9_014 | 4WF9 | 0.2001 | 0 | X | LSU rRNA | C | 386 | G | 387 | A | 388 | A | 389 | A | 390 | * | U | 336 | A | 337 | G | 338 | cWW | cWW | |
| 2 | IL_8B0X_074 | 8B0X | 0.1058 | 0 | a | LSU rRNA | C | 343 | A | 344 | A | 345 | A | 346 | A | 347 | * | U | 293 | A | 294 | G | 295 | cWW | cSH | cWW |
| 3 | IL_9E6Q_016 | 9E6Q | 0.0000 | 0 | 1 | LSU rRNA | C | 371 | G | 372 | A | 373 | A | 374 | A | 375 | * | U | 320 | A | 321 | G | 322 | cWW | cSH | cWW |
| 4 | IL_9DFE_011 | 9DFE | 0.1097 | 0 | 1A | LSU rRNA | C | 343 | G | 344 | A | 345 | A | 346 | A | 347 | * | U | 293 | A | 294 | G | 295 | cWW | cSH | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CGAAA*UAG | 3 |
| CAAAA*UAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GAA*A | 3 |
| AAA*A | 1 |
Release history
| Release | 4.0 |
|---|---|
| Date | 2025-08-13 |
| Status | New id, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (4)
- Basepair signature
- cWW-L-R-cSH-cWW
- Heat map statistics
- Min 0.11 | Avg 0.13 | Max 0.26
Coloring options: