IL_4V5M_001
3D structure
- PDB id
- 4V5M (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- tRNA tranlocation on the 70S ribosome: the pre-translocational translocation intermediate TI(PRE)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 7.8 Å
Loop
- Sequence
- UGA*UA
- Length
- 5 nucleotides
- Bulged bases
- 4V5M|1|AA|G|31
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V5M_001 not in the Motif Atlas
- Homologous match to IL_4LFB_001
- Geometric discrepancy: 0.1538
- The information below is about IL_4LFB_001
- Detailed Annotation
- Single bulged G
- Broad Annotation
- No text annotation
- Motif group
- IL_00225.14
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 50
Unit IDs
4V5M|1|AA|U|30
4V5M|1|AA|G|31
4V5M|1|AA|A|32
*
4V5M|1|AA|U|552
4V5M|1|AA|A|553
Current chains
- Chain AA
- 16S RRNA
Nearby chains
- Chain AL
- 30S RIBOSOMAL PROTEIN S12
Coloring options: