IL_4V5M_019
3D structure
- PDB id
- 4V5M (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- tRNA tranlocation on the 70S ribosome: the pre-translocational translocation intermediate TI(PRE)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 7.8 Å
Loop
- Sequence
- GAAACCC*GGACUGAC
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V5M_019 not in the Motif Atlas
- Homologous match to IL_6CZR_131
- Geometric discrepancy: 0.1841
- The information below is about IL_6CZR_131
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_30149.1
- Basepair signature
- cWW-L-R-L-R-tWH-L-R-L-R-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
4V5M|1|AA|G|450
4V5M|1|AA|A|451
4V5M|1|AA|A|452
4V5M|1|AA|A|453
4V5M|1|AA|C|454
4V5M|1|AA|C|455
4V5M|1|AA|C|456
*
4V5M|1|AA|G|475
4V5M|1|AA|G|476
4V5M|1|AA|A|477
4V5M|1|AA|C|479
4V5M|1|AA|U|480
4V5M|1|AA|G|481
4V5M|1|AA|A|482
4V5M|1|AA|C|483
Current chains
- Chain AA
- 16S RRNA
Nearby chains
- Chain AP
- 30S RIBOSOMAL PROTEIN S16
Coloring options: