IL_4V5M_047

3D structure

PDB id

4V5M (explore in PDB, NAKB, or RNA 3D Hub)

Description

tRNA tranlocation on the 70S ribosome: the pre-translocational translocation intermediate TI(PRE)

Experimental method

ELECTRON MICROSCOPY

Resolution

7.8 Å

Loop

Sequence

GAUGC*GCUAAUC

Length

12 nucleotides

Bulged bases

4V5M|1|AA|U|1257, 4V5M|1|AA|A|1280

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V5M|1|AA|G|1255
4V5M|1|AA|A|1256
4V5M|1|AA|U|1257
4V5M|1|AA|G|1258
4V5M|1|AA|C|1259
*
4V5M|1|AA|G|1276
4V5M|1|AA|C|1277
4V5M|1|AA|U|1278
4V5M|1|AA|A|1279
4V5M|1|AA|A|1280
4V5M|1|AA|U|1281
4V5M|1|AA|C|1282

Current chains

Chain AA

16S RRNA

Nearby chains

Chain AC

30S RIBOSOMAL PROTEIN S3

Chain AI

30S RIBOSOMAL PROTEIN S9

Chain AJ

30S RIBOSOMAL PROTEIN S10

Chain AN

30S RIBOSOMAL PROTEIN S14 TYPE Z