IL_4V5M_070

3D structure

PDB id

4V5M (explore in PDB, NAKB, or RNA 3D Hub)

Description

tRNA tranlocation on the 70S ribosome: the pre-translocational translocation intermediate TI(PRE)

Experimental method

ELECTRON MICROSCOPY

Resolution

7.8 Å

Loop

Sequence

UAG*CGAAA

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V5M_070 not in the Motif Atlas

Homologous match to IL_7RQB_013

Geometric discrepancy: 0.2005

The information below is about IL_7RQB_013

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_69440.1

Basepair signature

cWW-L-R-cSH-cWW

Number of instances in this motif group

3

Unit IDs

4V5M|1|BA|U|293
4V5M|1|BA|A|294
4V5M|1|BA|G|295
*
4V5M|1|BA|C|343
4V5M|1|BA|G|344
4V5M|1|BA|A|345
4V5M|1|BA|A|346
4V5M|1|BA|A|347

Current chains

Chain BA

23S RIBOSOMAL RNA

Nearby chains

Chain BY

50S RIBOSOMAL PROTEIN L24