IL_4V5M_163
3D structure
- PDB id
- 4V5M (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- tRNA tranlocation on the 70S ribosome: the pre-translocational translocation intermediate TI(PRE)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 7.8 Å
Loop
- Sequence
- CGUG*CGCG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary:
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V5M_163 not in the Motif Atlas
- Geometric match to IL_4WF9_109
- Geometric discrepancy: 0.2545
- The information below is about IL_4WF9_109
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_30621.4
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 66
Unit IDs
4V5M|1|BB|C|20
4V5M|1|BB|G|21
4V5M|1|BB|U|22
4V5M|1|BB|G|23
*
4V5M|1|BB|C|60
4V5M|1|BB|G|61
4V5M|1|BB|C|62
4V5M|1|BB|G|63
Current chains
- Chain BB
- 5S RIBOSOMAL RNA
Nearby chains
- Chain BS
- 50S RIBOSOMAL PROTEIN L18
Coloring options: