IL_4V5N_037

3D structure

PDB id

4V5N (explore in PDB, NAKB, or RNA 3D Hub)

Description

tRNA translocation on the 70S ribosome: the post- translocational translocation intermediate TI(POST)

Experimental method

ELECTRON MICROSCOPY

Resolution

7.6 Å

Loop

Sequence

GCAC*GUUCCC

Length

10 nucleotides

Bulged bases

4V5N|1|AA|C|934

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V5N_037 not in the Motif Atlas

Geometric match to IL_6CZR_149

Geometric discrepancy: 0.2297

The information below is about IL_6CZR_149

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_93211.1

Basepair signature

cWW-cWS-cWW-L-R-cWW-L

Number of instances in this motif group

2

Unit IDs

4V5N|1|AA|G|933
4V5N|1|AA|C|934
4V5N|1|AA|A|935
4V5N|1|AA|C|936
*
4V5N|1|AA|G|1379
4V5N|1|AA|U|1380
4V5N|1|AA|U|1381
4V5N|1|AA|C|1382
4V5N|1|AA|C|1383
4V5N|1|AA|C|1384

Current chains

Chain AA

16S RRNA

Nearby chains

Chain AG

30S RIBOSOMAL PROTEIN S7

Chain AI

30S RIBOSOMAL PROTEIN S9

Chain AV

Transfer RNA; tRNA

Chain AX

MRNA