IL_4V5N_118

3D structure

PDB id

4V5N (explore in PDB, NAKB, or RNA 3D Hub)

Description

tRNA translocation on the 70S ribosome: the post- translocational translocation intermediate TI(POST)

Experimental method

ELECTRON MICROSCOPY

Resolution

7.6 Å

Loop

Sequence

GGAAG*UGACAAC

Length

12 nucleotides

Bulged bases

4V5N|1|BA|C|1543

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V5N_118 not in the Motif Atlas

Homologous match to IL_7RQB_063

Geometric discrepancy: 0.457

The information below is about IL_7RQB_063

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_02656.1

Basepair signature

cWW-L-R-L-R-L-R-L-cWW

Number of instances in this motif group

2

Unit IDs

4V5N|1|BA|G|1526
4V5N|1|BA|G|1527
4V5N|1|BA|A|1528
4V5N|1|BA|A|1528|||A
4V5N|1|BA|G|1529
*
4V5N|1|BA|U|1540
4V5N|1|BA|G|1541
4V5N|1|BA|A|1542
4V5N|1|BA|C|1543
4V5N|1|BA|A|1544
4V5N|1|BA|A|1545
4V5N|1|BA|C|1546

Current chains

Chain BA

23S RIBOSOMAL RNA

Nearby chains