IL_4V5O_005
3D structure
- PDB id
- 4V5O (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH INITIATION FACTOR 1.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.93 Å
Loop
- Sequence
- UGCCAG*CUG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V5O_005 not in the Motif Atlas
- Homologous match to IL_4V88_389
- Geometric discrepancy: 0.2031
- The information below is about IL_4V88_389
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_61299.2
- Basepair signature
- cWW-L-R-L-cWW-L-L
- Number of instances in this motif group
- 3
Unit IDs
4V5O|1|AA|U|57
4V5O|1|AA|G|58
4V5O|1|AA|C|59
4V5O|1|AA|C|60
4V5O|1|AA|A|61
4V5O|1|AA|G|62
*
4V5O|1|AA|C|83
4V5O|1|AA|U|84
4V5O|1|AA|G|85
Current chains
- Chain AA
- 18S RRNA
Nearby chains
- Chain AP
- RPS24E
- Chain AW
- 40S RIBOSOMAL PROTEIN S4
- Chain AY
- RPS6E
Coloring options: