IL_4V5O_034

3D structure

PDB id

4V5O (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH INITIATION FACTOR 1.

Experimental method

X-RAY DIFFRACTION

Resolution

3.93 Å

Loop

Sequence

UGCAAAC*GGGAGUA

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V5O|1|AA|U|680
4V5O|1|AA|G|681
4V5O|1|AA|C|682
4V5O|1|AA|A|683
4V5O|1|AA|A|684
4V5O|1|AA|A|685
4V5O|1|AA|C|686
*
4V5O|1|AA|G|715
4V5O|1|AA|G|716
4V5O|1|AA|G|717
4V5O|1|AA|A|718
4V5O|1|AA|G|719
4V5O|1|AA|U|720
4V5O|1|AA|A|721

Current chains

Chain AA

18S RRNA

Nearby chains

Chain AW

40S RIBOSOMAL PROTEIN S4