IL_4V5O_066
3D structure
- PDB id
- 4V5O (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH INITIATION FACTOR 1.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.93 Å
Loop
- Sequence
- ACUAG*CUUCU
- Length
- 10 nucleotides
- Bulged bases
- 4V5O|1|AA|C|1318, 4V5O|1|AA|U|1319
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V5O_066 not in the Motif Atlas
- Homologous match to IL_8CRE_459
- Geometric discrepancy: 0.3362
- The information below is about IL_8CRE_459
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4V5O|1|AA|A|1317
4V5O|1|AA|C|1318
4V5O|1|AA|U|1319
4V5O|1|AA|A|1320
4V5O|1|AA|G|1321
*
4V5O|1|AA|C|1346
4V5O|1|AA|U|1347
4V5O|1|AA|U|1348
4V5O|1|AA|C|1349
4V5O|1|AA|U|1350
Current chains
- Chain AA
- 18S RRNA
Nearby chains
- Chain AC
- KH DOMAIN CONTAINING PROTEIN
- Chain AI
- RPS16E, 40S RIBOSOMAL PROTEIN RPS16E
- Chain AJ
- RIBOSOMAL PROTEIN S10 CONTAINING PROTEIN
- Chain AR
- RACK1
Coloring options: