IL_4V5O_072
3D structure
- PDB id
- 4V5O (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH INITIATION FACTOR 1.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.93 Å
Loop
- Sequence
- GGGAUA*UUGAAC
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V5O_072 not in the Motif Atlas
- Geometric match to IL_4V88_462
- Geometric discrepancy: 0.154
- The information below is about IL_4V88_462
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_82488.1
- Basepair signature
- cWW-tSH-tSH-tHS-cWW-cWW
- Number of instances in this motif group
- 7
Unit IDs
4V5O|1|AA|G|1512
4V5O|1|AA|G|1513
4V5O|1|AA|G|1514
4V5O|1|AA|A|1515
4V5O|1|AA|U|1516
4V5O|1|AA|A|1517
*
4V5O|1|AA|U|1538
4V5O|1|AA|U|1539
4V5O|1|AA|G|1540
4V5O|1|AA|A|1541
4V5O|1|AA|A|1542
4V5O|1|AA|C|1543
Current chains
- Chain AA
- 18S RRNA
Nearby chains
- Chain A8
- RPS25E
- Chain AM
- RPS18E
- Chain AT
- RPS19E
- Chain BF
- EIF1
Coloring options: