IL_4V5O_107

3D structure

PDB id

4V5O (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH INITIATION FACTOR 1.

Experimental method

X-RAY DIFFRACTION

Resolution

3.93 Å

Loop

Sequence

GAACA*UUAGC

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

Triple sheared

Broad Annotation

No text annotation

Motif group

IL_56467.2

Basepair signature

cWW-tSH-tHS-tHS-cWW

Number of instances in this motif group

38

Unit IDs

4V5O|1|BA|G|509
4V5O|1|BA|A|510
4V5O|1|BA|A|511
4V5O|1|BA|C|512
4V5O|1|BA|A|513
*
4V5O|1|BA|U|525
4V5O|1|BA|U|526
4V5O|1|BA|A|527
4V5O|1|BA|G|528
4V5O|1|BA|C|529

Current chains

Chain BA

18S RRNA

Nearby chains

Chain BD

RIBOSOMAL PROTEIN S4 CONTAINING PROTEIN

Chain BP

RPS24E