IL_4V5O_124

3D structure

PDB id

4V5O (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH INITIATION FACTOR 1.

Experimental method

X-RAY DIFFRACTION

Resolution

3.93 Å

Loop

Sequence

GUAUU*AGGAC

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_50157.1

Basepair signature

cWW-cWW-cWW-cWW-cWW

Number of instances in this motif group

5

Unit IDs

4V5O|1|BA|G|863
4V5O|1|BA|U|864
4V5O|1|BA|A|865
4V5O|1|BA|U|866
4V5O|1|BA|U|867
*
4V5O|1|BA|A|901
4V5O|1|BA|G|902
4V5O|1|BA|G|903
4V5O|1|BA|A|904
4V5O|1|BA|C|905

Current chains

Chain BA

18S RRNA

Nearby chains

Chain B4

40S RIBOSOMAL PROTEIN S3A

Chain B5

RIBOSOMAL PROTEIN S26E CONTAINING PROTEIN

Chain BK

RPS14E