IL_4V5O_161

3D structure

PDB id

4V5O (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH INITIATION FACTOR 1.

Experimental method

X-RAY DIFFRACTION

Resolution

3.93 Å

Loop

Sequence

UAGUAAC*GGAACAA

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_06267.1

Basepair signature

cWW-cWW-L-R-R-R-L-L-cWW-cWW

Number of instances in this motif group

1

Unit IDs

4V5O|1|BA|U|1622
4V5O|1|BA|A|1623
4V5O|1|BA|G|1624
4V5O|1|BA|U|1625
4V5O|1|BA|A|1626
4V5O|1|BA|A|1627
4V5O|1|BA|C|1628
*
4V5O|1|BA|G|1697
4V5O|1|BA|G|1698
4V5O|1|BA|A|1699
4V5O|1|BA|A|1700
4V5O|1|BA|C|1701
4V5O|1|BA|A|1702
4V5O|1|BA|A|1703

Current chains

Chain BA

18S RRNA

Nearby chains

Chain AM

RPS18E

Chain BL

40S RIBOSOMAL PROTEIN S12