IL_4V5O_169

3D structure

PDB id

4V5O (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH INITIATION FACTOR 1.

Experimental method

X-RAY DIFFRACTION

Resolution

3.93 Å

Loop

Sequence

CUGUGAAAAAAU*ACAUUAGCAUG

Length

23 nucleotides

Bulged bases

4V5O|1|AA|U|777

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V5O|1|AA|C|731
4V5O|1|AA|U|732
4V5O|1|AA|G|733
4V5O|1|AA|U|734
4V5O|1|AA|G|735
4V5O|1|AA|A|736
4V5O|1|AA|A|737
4V5O|1|AA|A|738
4V5O|1|AA|A|739
4V5O|1|AA|A|740
4V5O|1|AA|A|741
4V5O|1|AA|U|742
*
4V5O|1|AA|A|774
4V5O|1|AA|C|775
4V5O|1|AA|A|776
4V5O|1|AA|U|777
4V5O|1|AA|U|778
4V5O|1|AA|A|779
4V5O|1|AA|G|780
4V5O|1|AA|C|781
4V5O|1|AA|A|782
4V5O|1|AA|U|783
4V5O|1|AA|G|784

Current chains

Chain AA

18S RRNA

Nearby chains

Chain AD

RIBOSOMAL PROTEIN S4 CONTAINING PROTEIN

Chain AH

RIBOSOMAL PROTEIN S8 CONTAINING PROTEIN

Chain AQ

RIBOSOMAL PROTEIN S17 CONTAINING PROTEIN

Chain AW

40S RIBOSOMAL PROTEIN S4