IL_4V5O_176
3D structure
- PDB id
- 4V5O (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH INITIATION FACTOR 1.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.93 Å
Loop
- Sequence
- GCGCAAAAA*UUAUUAAUAC
- Length
- 19 nucleotides
- Bulged bases
- 4V5O|1|AA|G|1452, 4V5O|1|AA|A|1493, 4V5O|1|AA|U|1495
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4V5O|1|AA|G|1450
4V5O|1|AA|C|1451
4V5O|1|AA|G|1452
4V5O|1|AA|C|1453
4V5O|1|AA|A|1454
4V5O|1|AA|A|1455
4V5O|1|AA|A|1456
4V5O|1|AA|A|1457
4V5O|1|AA|A|1458
*
4V5O|1|AA|U|1491
4V5O|1|AA|U|1492
4V5O|1|AA|A|1493
4V5O|1|AA|U|1494
4V5O|1|AA|U|1495
4V5O|1|AA|A|1496
4V5O|1|AA|A|1497
4V5O|1|AA|U|1498
4V5O|1|AA|A|1499
4V5O|1|AA|C|1500
Current chains
- Chain AA
- 18S RRNA
Nearby chains
- Chain A8
- RPS25E
- Chain AC
- KH DOMAIN CONTAINING PROTEIN
- Chain AG
- RIBOSOMAL PROTEIN S7 CONTAINING PROTEIN
- Chain AI
- RPS16E, 40S RIBOSOMAL PROTEIN RPS16E
- Chain AJ
- RIBOSOMAL PROTEIN S10 CONTAINING PROTEIN
- Chain AN
- RPS29E
- Chain AT
- RPS19E
Coloring options: