IL_4V5Q_189
3D structure
- PDB id
- 4V5Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The crystal structure of EF-Tu and G24A-tRNA-Trp bound to a near- cognate codon on the 70S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- CGUAAAG*CG
- Length
- 9 nucleotides
- Bulged bases
- 4V5Q|1|CA|A|572
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V5Q_189 not in the Motif Atlas
- Homologous match to IL_4LFB_022
- Geometric discrepancy: 0.0767
- The information below is about IL_4LFB_022
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_38186.6
- Basepair signature
- cWW-L-cWW-L-L-R
- Number of instances in this motif group
- 4
Unit IDs
4V5Q|1|CA|C|569
4V5Q|1|CA|G|570
4V5Q|1|CA|U|571
4V5Q|1|CA|A|572
4V5Q|1|CA|A|573
4V5Q|1|CA|A|574
4V5Q|1|CA|G|575
*
4V5Q|1|CA|C|880
4V5Q|1|CA|G|881
Current chains
- Chain CA
- 16S RRNA
Nearby chains
- Chain CE
- 30S RIBOSOMAL PROTEIN S5
- Chain CL
- 30S RIBOSOMAL PROTEIN S12
- Chain CQ
- 30S RIBOSOMAL PROTEIN S17
Coloring options: