IL_4V5S_227
3D structure
- PDB id
- 4V5S (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The crystal structure of EF-Tu and G24A-tRNA-Trp bound to a cognate codon on the 70S ribosome.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- ACC*GGGU
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V5S_227 not in the Motif Atlas
- Homologous match to IL_5E81_376
- Geometric discrepancy: 0.4304
- The information below is about IL_5E81_376
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_86319.3
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 269
Unit IDs
4V5S|1|CY|A|26
4V5S|1|CY|C|27
4V5S|1|CY|C|28
*
4V5S|1|CY|G|42
4V5S|1|CY|G|43
4V5S|1|CY|G|44
4V5S|1|CY|U|45
Current chains
- Chain CY
- A-SITE TRNA G24A TRP-TRNA TRP
Nearby chains
- Chain CA
- Small subunit ribosomal RNA; SSU rRNA
- Chain CL
- 30S RIBOSOMAL PROTEIN S12
- Chain DA
- Large subunit ribosomal RNA; LSU rRNA
Coloring options: