IL_4V61_016

3D structure

PDB id

4V61 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Homology model for the Spinach chloroplast 30S subunit fitted to 9.4A cryo-EM map of the 70S chlororibosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

9.4 Å

Loop

Sequence

AGGCAGAAGG*UCGUGAACU

Length

19 nucleotides

Bulged bases

4V61|1|AA|A|383

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V61|1|AA|A|379
4V61|1|AA|G|380
4V61|1|AA|G|381
4V61|1|AA|C|382
4V61|1|AA|A|383
4V61|1|AA|G|384
4V61|1|AA|A|385
4V61|1|AA|A|386
4V61|1|AA|G|387
4V61|1|AA|G|388
*
4V61|1|AA|U|397
4V61|1|AA|C|398
4V61|1|AA|G|399
4V61|1|AA|U|400
4V61|1|AA|G|401
4V61|1|AA|A|402
4V61|1|AA|A|403
4V61|1|AA|C|404
4V61|1|AA|U|405

Current chains

Chain AA

16S rRNA

Nearby chains

Chain AD

Ribosomal Protein S4