IL_4V61_030

3D structure

PDB id

4V61 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Homology model for the Spinach chloroplast 30S subunit fitted to 9.4A cryo-EM map of the 70S chlororibosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

9.4 Å

Loop

Sequence

GGCGCU*GCAGUGU

Length

13 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V61|1|AA|G|777
4V61|1|AA|G|778
4V61|1|AA|C|779
4V61|1|AA|G|780
4V61|1|AA|C|781
4V61|1|AA|U|782
*
4V61|1|AA|G|799
4V61|1|AA|C|800
4V61|1|AA|A|801
4V61|1|AA|G|802
4V61|1|AA|U|803
4V61|1|AA|G|804
4V61|1|AA|U|805

Current chains

Chain AA

16S rRNA

Nearby chains

Chain AB

Ribosomal Protein S2

Chain AH

Ribosomal Protein S8

Chain AR

Ribosomal Protein S18

Chain AU

Ribosomal Protein S21