IL_4V61_083

3D structure

PDB id

4V61 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Homology model for the Spinach chloroplast 30S subunit fitted to 9.4A cryo-EM map of the 70S chlororibosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

9.4 Å

Loop

Sequence

CGGUGCGGGC*GUACCAAAUCG

Length

21 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V61|1|BA|C|883
4V61|1|BA|G|884
4V61|1|BA|G|885
4V61|1|BA|U|886
4V61|1|BA|G|887
4V61|1|BA|C|888
4V61|1|BA|G|889
4V61|1|BA|G|890
4V61|1|BA|G|891
4V61|1|BA|C|892
*
4V61|1|BA|G|903
4V61|1|BA|U|904
4V61|1|BA|A|905
4V61|1|BA|C|906
4V61|1|BA|C|907
4V61|1|BA|A|908
4V61|1|BA|A|909
4V61|1|BA|A|910
4V61|1|BA|U|911
4V61|1|BA|C|912
4V61|1|BA|G|913

Current chains

Chain BA

23S rRNA

Nearby chains

Chain BB

5S ribosomal RNA; 5S rRNA

Chain BO

Ribosomal Protein L16

Chain BQ

Ribosomal Protein L18