IL_4V61_089

3D structure

PDB id

4V61 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Homology model for the Spinach chloroplast 30S subunit fitted to 9.4A cryo-EM map of the 70S chlororibosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

9.4 Å

Loop

Sequence

GCAGAGACAG*UCGAGC

Length

16 nucleotides

Bulged bases

4V61|1|BA|G|1073, 4V61|1|BA|A|1074

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V61|1|BA|G|1070
4V61|1|BA|C|1071
4V61|1|BA|A|1072
4V61|1|BA|G|1073
4V61|1|BA|A|1074
4V61|1|BA|G|1075
4V61|1|BA|A|1076
4V61|1|BA|C|1077
4V61|1|BA|A|1078
4V61|1|BA|G|1079
*
4V61|1|BA|U|1136
4V61|1|BA|C|1137
4V61|1|BA|G|1138
4V61|1|BA|A|1139
4V61|1|BA|G|1140
4V61|1|BA|C|1141

Current chains

Chain BA

23S rRNA

Nearby chains

Chain B6

Ribosomal Protein L36

Chain BI

Ribosomal Protein L6