IL_4V61_094

3D structure

PDB id

4V61 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Homology model for the Spinach chloroplast 30S subunit fitted to 9.4A cryo-EM map of the 70S chlororibosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

9.4 Å

Loop

Sequence

UGUUAG*CGAAG

Length

11 nucleotides

Bulged bases

4V61|1|BA|U|1226

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V61|1|BA|U|1224
4V61|1|BA|G|1225
4V61|1|BA|U|1226
4V61|1|BA|U|1227
4V61|1|BA|A|1228
4V61|1|BA|G|1229
*
4V61|1|BA|C|1259
4V61|1|BA|G|1260
4V61|1|BA|A|1261
4V61|1|BA|A|1262
4V61|1|BA|G|1263

Current chains

Chain BA

23S rRNA

Nearby chains

Chain BG

Ribosomal Protein L4

Chain BN

Ribosomal Protein L15