IL_4V61_121

3D structure

PDB id

4V61 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Homology model for the Spinach chloroplast 30S subunit fitted to 9.4A cryo-EM map of the 70S chlororibosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

9.4 Å

Loop

Sequence

GUGACCUG*CAGGGGAGC

Length

17 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V61|1|BA|G|1873
4V61|1|BA|U|1874
4V61|1|BA|G|1875
4V61|1|BA|A|1876
4V61|1|BA|C|1877
4V61|1|BA|C|1878
4V61|1|BA|U|1879
4V61|1|BA|G|1880
*
4V61|1|BA|C|1885
4V61|1|BA|A|1886
4V61|1|BA|G|1887
4V61|1|BA|G|1888
4V61|1|BA|G|1889
4V61|1|BA|G|1890
4V61|1|BA|A|1891
4V61|1|BA|G|1892
4V61|1|BA|C|1893

Current chains

Chain BA

23S rRNA

Nearby chains

Chain BD

Ribosomal Protein L1

Chain BN

Ribosomal Protein L15