IL_4V61_124

3D structure

PDB id

4V61 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Homology model for the Spinach chloroplast 30S subunit fitted to 9.4A cryo-EM map of the 70S chlororibosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

9.4 Å

Loop

Sequence

GACAG*CAUAUC

Length

11 nucleotides

Bulged bases

4V61|1|BA|C|2069, 4V61|1|BA|U|2630

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V61|1|BA|G|2067
4V61|1|BA|A|2068
4V61|1|BA|C|2069
4V61|1|BA|A|2070
4V61|1|BA|G|2071
*
4V61|1|BA|C|2628
4V61|1|BA|A|2629
4V61|1|BA|U|2630
4V61|1|BA|A|2631
4V61|1|BA|U|2632
4V61|1|BA|C|2633

Current chains

Chain BA

23S rRNA

Nearby chains

Chain B2

Ribosomal Protein L32

Chain BF

Ribosomal Protein L3

Chain BU

Ribosomal Protein L22